Trackastra Installation

Step-by-Step Protocol for Installing Trackastra

Installation: 

1. Go to the following link: https://github.com/weigertlab/trackastra

2. Create and activate a Conda environment:

conda create -n napari-trackastra -c conda-forge python=3.11

conda activate napari-trackastra

3. Install Napari: 

pip install “napari[all]”

4. Install Trackastra plugin:

pip install napari-trackastra

5. Optional installations:

• ILP support (more accurate linking):

pip install “trackastra[ilp]”

• Pretrained features (SAM2-based, improved performance):

For the model variant that uses SAM2 features

pip install "trackastra[etultra]"