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BEHAV3D: Dynamic immuno-organoid 3D imaging-transcriptomics platform to study tumor death dynamics and immune cell behavior.
BEHAV3D_Tumor_Profiler: Zero code computational framework for the comprehensive analysis of single tumor cell behaviors in live tissue and their interactions with the tumor microenvironment.
Behavioral-Guided-Transcriptomics: Analytical procedures required to integrate data from single-cell RNA sequencing of T cells with single-cell imaging data, providing for each sequenced cell probabilities of exhibiting different functional behaviors.
Below some user-friendly softwares for image segmentation and tracking and general data science resources for those starting to process (imaging) data.
FREE, USER-FRIENDLY PROTOCOLS for image processing
We understand that as a biologist, it can be challenging to access and fully utilize the cutting-edge tools developed by computational scientists. While many of these tools come with detailed descriptions, we've created simple, step-by-step guides to help you navigate some of the most advanced image processing tools with ease. Don’t forget to explore the other tools listed below as well!
Other free image processing tools incorporating machine learning tools
Getting started with
MACHINE LEARNING
Understanding DEEP-LEARNING
The Computational Biology and Bioinformatics (BCB) Connection CSIC
The Computational Biology and Bioinformatics (BCB) Connection of the CSIC aims to enhance, integrate, and expand BCB knowledge and resources within the organization. Whether you're new to computational science in Spain or an experienced professional seeking to broaden your network, we invite you to join us. Explore this welcome package, crafted to provide essential resources, introduce you to our collaborative environment, and ensure a smooth transition as you settle in.
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